gisaid database (influenza, covid-19 sequences) - SERP Analysis

https://gisaid.org/

https://pmc.ncbi.nlm.nih.gov/articles/PMC10129129/

https://en.wikipedia.org/wiki/GISAID

https://nextstrain.org/ncov/gisaid/global/6m

https://ngdc.cncb.ac.cn/databasecommons/database/id/6926

https://www.biorxiv.org/content/biorxiv/early/2023/05/13/2023.05.13.540634.full.pdf

https://pmc.ncbi.nlm.nih.gov/articles/PMC8668406/

https://www.diva-portal.org/smash/get/diva2:1701711/FULLTEXT01.pdf

https://www.sciencedirect.com/science/article/pii/S2772707624000274

https://www.nature.com/articles/d41586-021-01069-w

https://www.who.int/news/item/14-12-2022-gisaid-and-who-global-influenza-programme-bioinformatics-workshop-held-between-27-29th-september-2022-in-belfast--united-kingdom

https://www.thelancet.com/journals/lanam/article/PIIS2667-193X(21)00091-0/fulltext

https://www.scripps.edu/news-and-events/press-room/2022/20220606-hughes-gisaid.html

https://www.scmp.com/news/china/science/article/3219950/global-virus-database-pledges-clarity-operations-after-science-article-flags-access-issues

https://www.nature.com/articles/s41587-021-01040-0

https://www.economist.com/science-and-technology/2023/04/05/a-critical-genetic-database-is-under-fire

http://www.genomicseducation.hee.nhs.uk/blog/sequencing-covid-19-1-million-genomes/

https://academic.oup.com/nargab/article-pdf/5/2/lqad037/50075954/lqad037.pdf

https://www.pathogens.se/support_services/tutorial_ena/tutorial_ena_faqs/

https://www.dragonfly.co.nz/news/2022-07-01-audacity-instant.html

https://www.science.org/content/article/critics-decry-access-transparency-issues-key-trove-coronavirus-sequences

https://outbreak.info/sources

https://www.who.int/europe/news/item/17-11-2022-t-rkiye-uploads-100-000th-genome-sequence-to-gisaid

https://thebulletin.org/2022/05/how-a-dispute-over-sharing-coronavirus-genomes-is-threatening-a-vital-tool-for-tracking-variants/

https://www.paho.org/en/topics/influenza-sars-cov-2-rsv-and-other-respiratory-viruses/resvigen-respiratory-virus-genomic

https://www.researchgate.net/figure/Overall-flowchart-of-data-collection-and-data-analysis-GISAID-Global-Initiative-on_fig1_359516158

https://datascience.codata.org/articles/10.5334/dsj-2024-029

https://www.cdc.gov/advanced-molecular-detection/media/pdfs/ToolkitModule_3.5-508C.pdf

https://www.scielosp.org/article/rpsp/2023.v47/e21/

https://coronavirus.health.ny.gov/clinical-variant-data

https://docs.nextstrain.org/projects/ncov/en/latest/guides/data-prep/gisaid-full.html

https://cepi.net/cepi-creates-new-collaborative-taskforce-assess-impact-emerging-viral-strains-effectiveness-covid

https://www.science.org/content/article/new-scientist-run-virus-database-vows-be-transparently-run-and-simple-use

https://www.re3data.org/repository/r3d100010126

https://scicrunch.org/resolver/SCR_018279

https://www.siemens-healthineers.com/bg/molecular-diagnostics/molecular-diagnostics-in-vitro-diagnostics/ftd-sars-cov-2-assay/variants

https://www.sciencedirect.com/science/article/pii/S2667193X22002289

https://nap.nationalacademies.org/read/25879/chapter/5

https://datacatalog.hshsl.umaryland.edu/dataset/108

https://www.microbiologyresearch.org/content/journal/jgv/10.1099/jgv.0.001822?crawler=true

https://www.cell.com/cell/fulltext/S0092-8674(20)30820-5?uuid=uuid%3Ae4f998e3-7e38-4b7a-8489-5124a7eba205

https://journals.asm.org/doi/10.1128/mra.01109-20

https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2022.809887/xml/nlm

https://www.afroscreen.org/en/sequence-data-management-and-sharing/

https://www.mdpi.com/1999-4915/15/5/1158

https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-025-06046-y

https://ghdx.healthdata.org/record/gisaid-epiflu-database-2021-2022

https://www.cidrap.umn.edu/covid-19/who-details-discussions-over-newly-revealed-wuhan-market-sars-cov-2-sequences

https://virological.org/t/issues-with-sars-cov-2-sequencing-data/473

https://cepi-tr.tghn.org/archive/covax/enabling-sciences/gisaid/

https://www.scienceopen.com/document_file/3a8ae8b8-140a-4e16-9c5a-7f9ba9762240/PubMedCentral/3a8ae8b8-140a-4e16-9c5a-7f9ba9762240.pdf

https://www.news-medical.net/health/Viral-Clades-of-SARS-CoV-2.aspx

https://www.gov.uk/government/news/uk-completes-over-2-million-sars-cov-2-whole-genome-sequences

https://www.medrxiv.org/content/10.1101/2020.10.23.20218511v2.full-text

https://elifesciences.org/articles/63409

https://genome-euro.ucsc.edu/cgi-bin/hgPhyloPlace

https://academic.oup.com/jid/article-pdf/226/10/1704/46955666/jiac348.pdf

https://www.researchgate.net/figure/Full-genome-tree-of-all-outbreak-sequences-analyzed-by-GISAID-Available-at_fig1_340394888

https://m.facebook.com/ccthita/photos/the-global-initiative-on-sharing-all-influenza-data-gisaid-promotes-the-rapid-sh/1599663513561311/

https://cen.acs.org/biological-chemistry/genomics/genomic-epidemiology-tracking-spread-COVID/98/i17

https://journal.paho.org/en/articles/genomic-surveillance-and-sequencing-sars-cov-2-across-south-america

https://www.protocols.io/view/sars-cov-2-genomic-variation-african-perspective-bmhjk34n

https://www.ecdc.europa.eu/en/publications-data/data-virus-variants-covid-19-eueea

https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000970?crawler=true

https://www.shreveporttimes.com/story/news/2021/12/06/lsuhs-contributes-covid-sequencing-milestone-global-database/8854635002/

https://cov.lanl.gov/content/sequence/COV/CoV_links.html

https://scicrunch.org/resolver/RRID:SCR_018251

https://www.pasteur.fr/en/research-journal/news/covid-19-bioinformatics-and-biostatistics-hub-front-line

https://pgc.up.edu.ph/pgc-releases-6-complete-genomes-of-sars-cov-2-sequences/

https://science.thewire.in/health/covid-19-genetic-sequencing-data-gisaid-open-science/

https://journals.asm.org/doi/10.1128/mra.00511-21

https://pha4ge.org/wp-content/uploads/2022/02/giac003.pdf

https://www.sciencediplomacy.org/article/2020/we-can-do-better-lessons-learned-data-sharing-in-covid-19-pandemic-can-inform-future

http://www.fortunejournals.com/articles/inference-from-opensource-sequence-data-on-the-genetic-epidemiology-of-covid19-infection-in-africa.html

https://researchportal.port.ac.uk/en/datasets/dataset-gisaid-epicov-sars-cov-2-whole-genome-sequencing-database

https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0263678

https://onlinelibrary.wiley.com/doi/full/10.1002/hsr2.1052

https://www.cnn.com/2024/04/23/health/h5n1-usda-gisaid-genetic-sequences

http://www.thelancet.com/article/S2589750020301400/pdf

https://www.biorxiv.org/content/10.1101/2021.12.29.474469v1.full.pdf

https://biokeanos.com/source/GISAID%20EpiCoV%E2%84%A2%20Database

https://www.siemens-healthineers.com/fr-ch/molecular-diagnostics/molecular-diagnostics-in-vitro-diagnostics/ftd-sars-cov-2-assay/variants

https://www.a-star.edu.sg/News/astarNews/news/features/sharing-data-saving-lives-the-role-of-bioinformatics-during-the-pandemic

https://translational-medicine.biomedcentral.com/articles/10.1186/s12967-023-03996-w

https://www.chicago.gov/content/dam/city/sites/covid/reports/2022/CDPH_GISAID_Proportions_8-3-22.pdf

https://fairsharing.org/FAIRsharing.2f7f9f

https://github.com/qianqli/SARS-Cov-2--GISAID

https://www.gov.uk/government/news/uk-completes-over-one-million-sars-cov-2-whole-genome-sequences

https://datascience.codata.org/articles/10.5334/dsj-2021-028

https://twitter.com/UKHSA/status/1491835908252909569

https://www.aidshealth.org/2022/04/ahfs-global-public-health-institute-gisaid-team-up-on-genomic-sequencing/

https://www.pathogens.se/topics/influenza/resources/

https://weekly.chinacdc.cn/article/id/21792cdf-a54a-4a11-b6fe-68d50f817d91

https://axial.acs.org/medicinal-chemistry/blockchain-a-solution-for-information-overload-in-the-fight-against-covid-19

https://www.chicago.gov/content/dam/city/sites/covid/reports/2023/CDPH_GISAID_Proportions_1-9-2023.pdf

https://discovery.biothings.io/resource/c7bb20cb1ffed3af

https://www.mdpi.com/2076-2607/10/9/1785

https://www.dhs.wisconsin.gov/dph/memos/communicable-diseases/2020-28-bcd.pdf

https://virological.org/t/whole-genome-sequence-of-the-severe-acute-respiratory-syndrome-coronavirus-2-sars-cov-2-obtained-from-a-south-african-coronavirus-disease-2019-covid-19-patient/452