tcga-e2-a15a-06 - SERP Analysis

https://www.cell.com/cms/10.1016/j.xgen.2021.100067/attachment/a9bfcd5d-05e9-4c83-b60c-29a928c3b63e/mmc2.xlsx

https://wiki.cancerimagingarchive.net/x/soRF

https://portal.gdc.cancer.gov/cases/a8015490-9740-45c9-8bd2-eb6d1beefc2e

https://www.biorxiv.org/highwire/filestream/70556/field_highwire_adjunct_files/1/231217-2.pdf

https://cdn.amegroups.cn/static/public/tcr-24-1181-1.pdf

https://bioinformatics.mdanderson.org/NGCHM/compendia/TCGA/html/tcga_mirna_brca_v2.0_sample_sample.html

https://www.linkedomics.org/data_download/TCGA-BRCA/

https://www.cbioportal.org/results/cancerTypesSummary?case_set_id=all&gene_list=EED&cancer_study_list=5c8a7d55e4b046111fee2296

https://pmc.ncbi.nlm.nih.gov/articles/PMC7419649/

https://ccsm.uth.edu/ExonSkipDB/gene_search_result.cgi?page=page&type=quick_search&quick_search=5789

https://bioinformatics.mdanderson.org/NGCHM/compendia/TCGA/html/tcga_rnaseqv2_brca_v2.0_gene_sample.html

https://pmc.ncbi.nlm.nih.gov/articles/PMC4768948/

https://genome.cshlp.org/content/suppl/2014/11/13/gr.178194.114.DC1/Table_S13.xlsx

https://datacommons.cyverse.org/browse/iplant/home/shared/TCIA/TCGA-BRCA

https://cptac-data-portal.georgetown.edu/cptac/documents/CPTAC_TCGA_Breast_Cancer_iTRAQ_Sample_Mapping.xlsx

http://fcgportal.org/TCSA/TranscriptFusion.tab9.php?pageSize=20&page=80

https://journals.plos.org/ploscompbiol/article/file?type=supplementary&id=10.1371/journal.pcbi.1010939.s006&rev=2

https://compbio.uth.edu/FusionPDB/gene_search_result.cgi?page=page&type=quick_search&quick_search=7131

https://www.cell.com/cms/10.1016/j.isci.2023.106908/attachment/e93d00ac-5146-4617-969b-2bdfce0843dd/mmc3.xlsx

https://www.thno.org/v11/p7175/thnov11p7175s2.xlsx

https://cdn.amegroups.cn/static/public/atm-20-7005-1.pdf

http://genome.compbio.cs.cmu.edu/~jianma/software/NCIS/BRCA_samplelist.txt

https://api.gdc.cancer.gov/data/3819a4a3-062e-4d06-a840-f8b2d9824116

https://www.cancerimagingarchive.net/wp-content/uploads/Perou-TCGA-BRCA-MRIsPAM50GHI21NKI70-MAILED.xlsx

https://www.frontiersin.org/api/v4/articles/930933/file/Data_Sheet_1.CSV/930933_supplementary-materials_datasheets_1_csv/1

https://frontiersin.figshare.com/articles/dataset/Table_5_A_Class_of_Protein-Coding_RNAs_Binds_to_Polycomb_Repressive_Complex_2_and_Alters_Histone_Methylation_xlsx/16936312

http://www.cbioportal.org/patient?sampleId=TCGA-E2-A155-01&studyId=brca_tcga_pub2015

https://www.biorxiv.org/content/biorxiv/early/2020/01/17/2020.01.16.909382/DC1/embed/media-1.pdf?download=true

https://gdac.broadinstitute.org/runs/analyses__2013_05_23/reports/cancer/BRCA-TP/MutSigNozzleReportCV/BRCA-TP_coMut.pdf

https://zenodo.org/api/records/15580781/files/source_fig4c.csv/content

https://wulab.dfci.harvard.edu/sites/default/files/24891321_supp.pdf

https://gdac.broadinstitute.org/runs/analyses__2016_01_28/reports/cancer/BRCA-TP/mRNA_Clustering_CNMF/BRCA-TP.bestclus.txt

https://iimo.pl/img/workshop-1/slides6.pdf

https://github.com/OnlyBelter/DeSide_mini_example/blob/main/datasets/TCGA/tpm/tcga_sample_id2cancer_type.csv

https://colab.research.google.com/github/CancerDataAggregator/Community-Notebooks/blob/main/Tutorials/005_isbcgc.ipynb

http://genome.compbio.cs.cmu.edu/~jianma/software/DawnRank/patientsList.txt

https://genome.ucsc.edu/cgi-bin/hgTrackUi?g=cancerExpr

https://ccte.uchicago.edu/TCGA-Assembler/

https://isb-cancer-genomics-cloud.readthedocs.io/en/latest/sections/data/TCGA_top.html

https://registry.opendata.aws/tcga/

https://docs.cancergenomicscloud.org/docs/tcga-data

https://www.bioconductor.org/packages/devel/bioc/vignettes/TCGAutils/inst/doc/TCGAutils.html